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Terrestrial cyanobacteria grow as phototrophic biofilms and offer a wide spectrum of interesting products. For cultivation of phototrophic biofilms different reactor concepts have been developed in the last years. One of the main influencing factors is the surface material and the adhesion strength of the chosen production strain. In this work a flow chamber was developed, in which, in combination with optical coherence tomography and computational fluid dynamics simulation, an easy analysis of adhesion forces between different biofilms and varied surface materials is possible. Hereby, differences between two cyanobacteria strains and two surface materials were shown. With longer cultivation time of biofilms adhesion increased in all experiments. Additionally, the content of extracellular polymeric substances was analyzed and its role in surface adhesion was evaluated. To test the comparability of obtained results from the flow chamber with other methods, analogous experiments were conducted with a rotational rheometer, which proved to be successful. Thus, with the presented flow chamber an easy to implement method for analysis of biofilm adhesion was developed, which can be used in future research for determination of suitable combinations of microorganisms with cultivation surfaces on lab scale in advance of larger processes.
Microbiologically Induced Calcium Carbonate Precipitation (MICP) is a technology for improving soil characteristics, especially strength, that has been gaining increasing interest in literature during the last few years. Although a lot of influencing factors on the result of MICP are known, particle size and shape of the particles remain poorly understood. While destructive measuring of compressive strength or calcium carbonate content are important for the characterization of samples these methods give no insight into the internal structures and pore networks of the samples. X-ray microcomputed tomography (micro-CT) is a technique that is used to characterize the internals of rocks and to a certain degree MICP-treated soils. However, the impact of filtering and image processing of micro-CT Data depending on the type of MICP sample is poorly described in the literature. In this study, single fractions of local quarry were treated with MICP through the ureolytic microorganism Sporosarcina pasteurii to investigate the influence of particle size distribution on calcium carbonate content, unconfined compressive strength and the reduction of water permeability. Additionally, micro-CT was conducted to obtain insights into the resulting pore system. The impact of the Gauss filter und Non-local means filter on the resulting images and data on the pore network are discussed. The results show that particle size has a significant impact on the result of all tested parameters of biosandstone with lower particle size leading to higher strength and generally higher calcium carbonate content. Micro-CT data showed that the technology is feasible to gain valuable insights into the internal structures of biosandstone but the resolution and signal-to-noise ratio remain challenging, especially for samples with particle sizes smaller than 125 µm.
As productive biofilms are increasingly gaining interest in research, the quantitative monitoring of biofilm formation on- or offline for the process remains a challenge. Optical coherence tomography (OCT) is a fast and often used method for scanning biofilms, but it has difficulty scanning through more dense optical materials. X-ray microtomography (μCT) can measure biofilms in most geometries but is very time-consuming. By combining both methods for the first time, the weaknesses of both methods could be compensated. The phototrophic cyanobacterium Tolypothrix distorta was cultured in a moving bed photobioreactor inside a biocarrier with a semi-enclosed geometry. An automated workflow was developed to process µCT scans of the biocarriers. This allowed quantification of biomass volume and biofilm-coverage on the biocarrier, both globally and spatially resolved. At the beginning of the cultivation, a growth limitation was detected in the outer region of the carrier, presumably due to shear stress. In the later phase, light limitations could be found inside the biocarrier. µCT data and biofilm thicknesses measured by OCT displayed good correlation. The latter could therefore be used to rapidly measure the biofilm formation in a process. The methods presented here can help gain a deeper understanding of biofilms inside a process and detect any limitations.
